49 results found.

   CSA at EBI   [Provider code: ebi]   
The Catalytic Site Atlas (CSA) is a database documenting enzyme active sites and catalytic residues in enzymes of 3D structure. It uses a defined clas...
The Catalytic Site Atlas (CSA) is a database documenting enzyme active sites and catalytic residues in enzymes of 3D structure. It uses a defined classification for catalytic residues which includes only those residues thought to be directly involved in some aspect of the reaction catalysed by an enzyme.

Home: http://www.ebi.ac.uk/thornton-srv/databases/CSA/
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/csa:1a05
Uptime: 97%
   CharProt   [Namespace: charprot]  
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene nam...
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene name, symbol and various controlled vocabulary terms, including Gene Ontology terms, Enzyme Commission number and TransportDB accession.

URI: http://identifiers.org/charprot
Identifier pattern: ^CH_\d+$
Example: http://identifiers.org/charprot:CH_001923
   CharProt at JCVI  
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene nam...
CharProt is a database of biochemically characterized proteins designed to support automated annotation pipelines. Entries are annotated with gene name, symbol and various controlled vocabulary terms, including Gene Ontology terms, Enzyme Commission number and TransportDB accession.

Home: http://www.jcvi.org/charprotdb
Institution: J Craig Venter institute, Rockville, Maryland
Location: USA
Example: http://identifiers.org/charprot:CH_001923
Uptime: 84%
   CAZy   [Namespace: cazy]  
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates...
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates. These enzymes are classified into families based on structural features.

Synonyms: Carbohydrate-Active enzYmes
URI: http://identifiers.org/cazy
Identifier pattern: ^(GT|GH|PL|CE|CBM)\d+(\_\d+)?$
Example: http://identifiers.org/cazy:GT10
   CAZy at CNRS  
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates...
The Carbohydrate-Active Enzyme (CAZy) database is a resource specialized in enzymes that build and breakdown complex carbohydrates and glycoconjugates. These enzymes are classified into families based on structural features.

Home: http://www.cazy.org/
Institution: Architecture et Fonction des Macromolécules Biologiques, CNRS, Marseille
Location: France
Example: http://identifiers.org/cazy:GT10
Uptime: 100%
   Transport Classification Database   [Namespace: tcdb]  
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC...
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Synonyms: TCDB
URI: http://identifiers.org/tcdb
Identifier pattern: ^\d+(\.[A-Z])?(\.\d+)?(\.\d+)?(\.\d+)?$
Example: http://identifiers.org/tcdb:5.A.1.1.1
   TCDB  
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC...
The database details a comprehensive IUBMB approved classification system for membrane transport proteins known as the Transporter Classification (TC) system. The TC system is analogous to the Enzyme Commission (EC) system for classification of enzymes, but incorporates phylogenetic information additionally.

Home: http://www.tcdb.org/
Institution: Division of Biological Sciences, UCSD
Location: USA
Example: http://identifiers.org/tcdb:5.A.1.1.1
Uptime: 100%
   UniPathway Compound   [Namespace: unipathway.compound]  
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabol...
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabolic pathways and a controlled vocabulary for pathway annotation in UniProtKB. UniPathway data are cross-linked to existing metabolic resources such as ChEBI/Rhea, KEGG and MetaCyc. This collection references compounds.

URI: http://identifiers.org/unipathway.compound
Identifier pattern: ^UPC\d{5}$
Example: http://identifiers.org/unipathway.compound:UPC04349
   UniPathway Compound at Swiss Institute of Bioinformatics (SIB)  
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabol...
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabolic pathways and a controlled vocabulary for pathway annotation in UniProtKB. UniPathway data are cross-linked to existing metabolic resources such as ChEBI/Rhea, KEGG and MetaCyc. This collection references compounds.

Home: http://www.grenoble.prabi.fr/obiwarehouse/unipathway
Institution: Swiss Institute of Bioinformatics (SIB) and French National Institute for Research in Computer Science and Control
Location: Switzerland
Example: http://identifiers.org/unipathway.compound:UPC04349
Uptime: 33%
   UniPathway Reaction   [Namespace: unipathway.reaction]  
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabol...
UniPathway is a manually curated resource of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabolic pathways and a controlled vocabulary for pathway annotation in UniProtKB. UniPathway data are cross-linked to existing metabolic resources such as ChEBI/Rhea, KEGG and MetaCyc. This collection references individual reactions.

URI: http://identifiers.org/unipathway.reaction
Identifier pattern: ^UCR\d{5}$
Example: http://identifiers.org/unipathway.reaction:UCR00226
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