Registry

169 results found.

   Gramene Growth Stage Ontology   [Namespace: gramene.growthstage]  
Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic an...
Gramene is a comparative genome mapping database for grasses and crop plants. It combines a semi-automatically generated database of cereal genomic and expressed sequence tag sequences, genetic maps, map relations, quantitative trait loci (QTL), and publications, with a curated database of mutants (genes and alleles), molecular markers, and proteins. This collection refers to growth stage ontology information in Gramene.

URI: http://identifiers.org/gramene.growthstage
Identifier pattern: ^GRO\:\d+$
Example: http://identifiers.org/GRO:0007133
   Experimental Factor Ontology   [Namespace: efo]  
The Experimental Factor Ontology (EFO) provides a systematic description of many experimental variables available in EBI databases. It combines parts ...
The Experimental Factor Ontology (EFO) provides a systematic description of many experimental variables available in EBI databases. It combines parts of several biological ontologies, such as anatomy, disease and chemical compounds. The scope of EFO is to support the annotation, analysis and visualization of data handled by the EBI Functional Genomics Team.

Synonyms: EFO
URI: http://identifiers.org/efo
Identifier pattern: ^\d{7}$
Example: http://identifiers.org/efo:0004859
   Systems Biology Ontology   [Namespace: sbo]  
The goal of the Systems Biology Ontology is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being fa...
The goal of the Systems Biology Ontology is to develop controlled vocabularies and ontologies tailored specifically for the kinds of problems being faced in Systems Biology, especially in the context of computational modeling. SBO is a project of the BioModels.net effort.

Synonyms: SBO
URI: http://identifiers.org/sbo
Identifier pattern: ^SBO:\d{7}$
Example: http://identifiers.org/SBO:0000262
   Protein Ontology   [Namespace: pr]  
The PRotein Ontology (PRO) has been designed to describe the relationships of proteins and protein evolutionary classes, to delineate the multiple pro...
The PRotein Ontology (PRO) has been designed to describe the relationships of proteins and protein evolutionary classes, to delineate the multiple protein forms of a gene locus (ontology for protein forms), and to interconnect existing ontologies.

URI: http://identifiers.org/pr
Identifier pattern: ^PR\:\d+$
Example: http://identifiers.org/PR:000000024
   Plant Ontology   [Namespace: po]  
The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics ...
The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data.

Synonyms: PO
URI: http://identifiers.org/po
Identifier pattern: ^PO:\d+$
Example: http://identifiers.org/PO:0009089
   Brenda Tissue Ontology through OLS   [Provider code: ols]   
The Brenda tissue ontology is a structured controlled vocabulary eastablished to identify the source of an enzyme cited in the Brenda enzyme database....
The Brenda tissue ontology is a structured controlled vocabulary eastablished to identify the source of an enzyme cited in the Brenda enzyme database. It comprises terms of tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms.

Home: http://www.ebi.ac.uk/ols/ontologies/bto
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/BTO:0000146
Uptime: 99%
   The Environment Ontology through OLS   [Provider code: ols]   
The Environment Ontology is a resource and research target for the semantically controlled description of environmental entities. The ontology's initi...
The Environment Ontology is a resource and research target for the semantically controlled description of environmental entities. The ontology's initial aim was the representation of the biomes, environmental features, and environmental materials pertinent to genomic and microbiome-related investigations.

Home: http://www.ebi.ac.uk/ols/ontologies/envo
Institution: European Bioinformatics Institute, Hinxton, Cambridge
Location: UK
Example: http://identifiers.org/ENVO:09200010
Uptime: 100%
   Sequence Ontology   [Namespace: so]  
The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. It provides a common set of terms and definiti...
The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. It provides a common set of terms and definitions to facilitate the exchange, analysis and management of genomic data.

Synonyms: SO
URI: http://identifiers.org/so
Identifier pattern: ^SO:\d{7}$
Example: http://identifiers.org/SO:0000704
   Sequence Ontology  
The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. It provides a common set of terms and definiti...
The Sequence Ontology (SO) is a structured controlled vocabulary for the parts of a genomic annotation. It provides a common set of terms and definitions to facilitate the exchange, analysis and management of genomic data.

Home: http://www.sequenceontology.org/
Institution: Department of Molecular and Cellular Biology, University of California, Berkeley
Location: USA
Example: http://identifiers.org/SO:0000704
Uptime: 99%
   Ontology of Physics for Biology   [Namespace: opb]  
The OPB is a reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple struct...
The OPB is a reference ontology of classical physics as applied to the dynamics of biological systems. It is designed to encompass the multiple structural scales (multiscale atoms to organisms) and multiple physical domains (multidomain fluid dynamics, chemical kinetics, particle diffusion, etc.) that are encountered in the study and analysis of biological organisms.

Synonyms: OPB
URI: http://identifiers.org/opb
Identifier pattern: ^OPB_\d+$
Example: http://identifiers.org/opb:OPB_00573
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